STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06622.1Protein of unknown function DUF2207, membrane; COGs: COG4907 membrane protein; InterPro IPR018702; KEGG: apv:Apar_1023 membrane protein-like protein; PFAM: Protein of unknown function DUF2207, membrane; SPTR: Putative uncharacterized protein; IMG reference gene:2503575288; PFAM: Predicted membrane protein (DUF2207). (651 aa)    
Predicted Functional Partners:
AEB06294.1
ABC-2 type transporter; InterPro IPR013525; KEGG: ele:Elen_0561 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; IMG reference gene:2503574942; PFAM: ABC-2 type transporter.
 
     0.586
AEB06293.1
KEGG: ele:Elen_0562 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574941.
 
     0.543
AEB06985.1
COGs: COG0681 Signal peptidase I; InterPro IPR000223:IPR019759; KEGG: ccu:Ccur_00350 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Putative uncharacterized protein; TIGRFAM: signal peptidase I; IMG reference gene:2503575666; PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
  
    0.511
AEB06886.1
COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: hor:Hore_21540 phosphate uptake regulator, PhoU; PFAM: PhoU family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575561; PFAM: PhoU domain.
  
    0.492
AEB06890.1
DivIVA domain protein; InterPro IPR007793:IPR019933; KEGG: apv:Apar_0494 DivIVA family protein; PFAM: DivIVA family protein; SPTR: Putative uncharacterized protein; TIGRFAM: DivIVA domain; IMG reference gene:2503575565; PFAM: DivIVA protein; TIGRFAM: DivIVA domain.
  
     0.492
AEB06742.1
UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212; KEGG: ele:Elen_1244 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575415; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
 
    0.486
AEB07026.1
Protein of unknown function DUF164; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: apv:Apar_0733 protein of unknown function DUF164; PFAM: protein of unknown function DUF164; SPTR: Putative uncharacterized protein; IMG reference gene:2503575712; PFAM: Putative zinc ribbon domain.
 
     0.468
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
    0.462
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.461
AEB06215.1
LemA family protein; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: ele:Elen_0090 LemA family protein; PFAM: LemA family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574859; PFAM: LemA family.
 
     0.457
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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