STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (399 aa)    
Predicted Functional Partners:
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
 
 0.999
AEB06632.1
COGs: COG0213 Thymidine phosphorylase; InterProIPR017459:IPR000312:IPR013102:IPR017872:IPR 000053:IPR018090; KEGG: clo:HMPREF0868_0655 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; PRIAM: Pyrimidine-nucleoside phosphorylase; SPTR: Putative uncharacterized protein; TIGRFAM: pyrimidine-nucleoside phosphorylase; IMG reference gene:2503575298; PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bu [...]
 
 
 0.965
AEB06633.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
      0.962
AEB06638.1
COGs: COG0813 Purine-nucleoside phosphorylase; InterPro IPR000845:IPR004402:IPR018016; KEGG: cpy:Cphy_0752 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: Putative uncharacterized protein; TIGRFAM: purine nucleoside phosphorylase; IMG reference gene:2503575304; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD).
 
 0.920
AEB07289.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002139:IPR011611; KEGG: pap:PSPA7_3342 ribokinase; PFAM: PfkB domain protein; SPTR: Possible ribokinase; IMG reference gene:2503575991; PFAM: pfkB family carbohydrate kinase.
  
 
 0.917
rbsK
PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.917
AEB06756.1
COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: apv:Apar_0333 transketolase domain protein; PFAM: Transketolase domain-containing protein; PRIAM: Transketolase; SPTR: Transketolase domain protein; IMG reference gene:2503575429; PFAM: Transketolase, thiamine diphosphate binding domain.
    
 0.916
AEB07711.1
COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: lmc:Lm4b_01052 transketolase; PFAM: Transketolase domain-containing protein; SPTR: Transketolase, N-subunit; IMG reference gene:2503576431; PFAM: Transketolase, thiamine diphosphate binding domain.
    
 0.916
AEB06173.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR016066:IPR005844:IPR005845:IPR005841; KEGG: shi:Shel_23220 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: Putative uncharacterized protein; IMG reference gene:2503574816; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal dom [...]
    
 0.913
AEB07299.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR016066:IPR005844:IPR005845; KEGG: shi:Shel_23220 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: Phosphomannomutase; IMG reference gene:2503576003; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
    
 0.913
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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