STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEB06685.1Transcriptional regulator, DeoR family; COGs: COG2390 Transcriptional regulator contains sigma factor-related N-terminal domain; InterPro IPR007324; KEGG: lpj:JDM1_0910 citrate lyase regulator; PFAM: sugar-binding domain-containing protein; SPTR: Citrate lyase regulator; IMG reference gene:2503575354; PFAM: Putative sugar-binding domain. (318 aa)    
Predicted Functional Partners:
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
 
  0.861
AEB06691.1
COGs: COG3051 Citrate lyase alpha subunit; InterPro IPR006472; KEGG: lpj:JDM1_0915 citrate lyase, alpha chain; PFAM: Citrate lyase alpha subunit; PRIAM: Citrate CoA-transferase; SPTR: Citrate lyase, alpha chain; TIGRFAM: citrate lyase, alpha subunit; IMG reference gene:2503575360; PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit.
 
 
  0.853
AEB06688.1
Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
    0.799
AEB06690.1
COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000:IPR011206:IPR006475; KEGG: lpj:JDM1_0914 citrate lyase, beta chain; PFAM: HpcH/HpaI aldolase; PRIAM: Citryl-CoA lyase; SPTR: Citrate lyase, beta chain; TIGRFAM: citrate lyase, beta subunit; IMG reference gene:2503575359; PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: citrate lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.767
citG
triphosphoribosyl-dephospho-CoA synthase CitG; COGs: COG1767 Triphosphoribosyl-dephospho-CoA synthetase; InterPro IPR002736:IPR013838:IPR017551; KEGG: lpj:JDM1_0903 triphosphoribosyl-dephospho-CoA synthase; PFAM: triphosphoribosyl-dephospho-CoA protein; PRIAM: Triphosphoribosyl-dephospho-CoA synthase; SPTR: Triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; IMG reference gene:2503575362; PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG.
 
     0.716
AEB06692.1
holo-ACP synthase CitX; COGs: COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase); InterPro IPR005551; KEGG: ooe:OEOE_0424 phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase); PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; SPTR: CitXG protein, includes Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX; IMG reference gene:2503575361; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX.
 
     0.688
AEB06686.1
Malic protein NAD-binding protein; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR001891; KEGG: ooe:OEOE_0418 malate oxidoreductase; PFAM: malic protein NAD-binding; malic protein domain protein; SPTR: Putative oxaloacetate decarboxylase; IMG reference gene:2503575355; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
 
  
 0.661
AEB06687.1
Auxin Efflux Carrier; COGs: COG0679 permease; InterPro IPR004776; KEGG: ooe:OEOE_0419 putative citrate transporter; PFAM: Auxin Efflux Carrier; SPTR: Putative citrate transporter; IMG reference gene:2503575356; PFAM: Membrane transport protein.
       0.471
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
   
 0.449
AEB07356.1
COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020830:IPR020832:IPR006424:IPR020828:IPR 020829:IPR020831; KEGG: cbt:CLH_2814 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase (Phosphorylating); TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; IMG reference gene:2503576066; PFAM: G [...]
  
  
 0.422
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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