STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06704.1GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: san:gbs0028 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575373. (256 aa)    
Predicted Functional Partners:
AEB06706.1
DEAD/DEAH box helicase domain protein; COGs: COG4581 Superfamily II RNA helicase; InterPro IPR014021:IPR001650:IPR011545:IPR014001; KEGG: ele:Elen_1453 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575375; PFAM: Domain of unknown function (DUF3516); Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
       0.783
AEB06705.1
Hypothetical protein; IMG reference gene:2503575374.
       0.773
AEB06161.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR010499; KEGG: dhd:Dhaf_2598 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription activator effector binding; SMART: regulatory protein MerR; SPTR: Transcriptional regulator; IMG reference gene:2503574802; PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain.
 
  
 0.654
AEB07825.1
KEGG: shi:Shel_25980 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2503576549; PFAM: Protein of unknown function (DUF2992).
 
     0.625
AEB06387.1
InterPro IPR011701; KEGG: ele:Elen_2733 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Permeases of the major facilitator superfamily; IMG reference gene:2503575040; PFAM: Major Facilitator Superfamily.
 
   
 0.576
AEB06386.1
Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: ele:Elen_2734 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503575039; PFAM: Bacterial regulatory proteins, tetR family.
 
  
 0.509
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.507
tsaD
(SSU ribosomal protein S18P)-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.493
AEB06707.1
COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: msi:Msm_0965 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; SPTR: 3-hydroxyacyl-CoA dehydrogenase family protein; IMG reference gene:2503575376; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
       0.488
AEB06518.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ele:Elen_1535 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503575182; PFAM: Predicted permease.
 
    0.485
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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