STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06706.1DEAD/DEAH box helicase domain protein; COGs: COG4581 Superfamily II RNA helicase; InterPro IPR014021:IPR001650:IPR011545:IPR014001; KEGG: ele:Elen_1453 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575375; PFAM: Domain of unknown function (DUF3516); Helicase conserved C-terminal domain; DEAD/DEAH box helicase. (884 aa)    
Predicted Functional Partners:
AEB06704.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: san:gbs0028 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575373.
       0.783
AEB06705.1
Hypothetical protein; IMG reference gene:2503575374.
       0.773
AEB06830.1
KEGG: ele:Elen_2265 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575505.
 
     0.604
AEB07068.1
COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: apv:Apar_0753 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575758; PFAM: FHA domain.
 
   
 0.563
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.495
AEB06707.1
COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: msi:Msm_0965 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; SPTR: 3-hydroxyacyl-CoA dehydrogenase family protein; IMG reference gene:2503575376; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
       0.477
AEB06744.1
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593:IPR017871; KEGG: ele:Elen_2744 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575417; PFAM: ABC transporter.
 
     0.477
AEB07752.1
COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR006162; KEGG: apv:Apar_1341 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576473; PFAM: Protein of unknown function (DUF2662); FHA domain.
 
   
 0.471
AEB06711.1
COGs: COG0421 Spermidine synthase; InterPro IPR001045:IPR002160; KEGG: ccu:Ccur_04160 spermidine synthase; PFAM: Spermine synthase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575380; PFAM: Spermine/spermidine synthase.
 
     0.459
AEB07880.1
GTP-binding protein TypA; COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795:IPR004161:IPR000640:IPR005225:IPR 006298; KEGG: apv:Apar_0016 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; IMG reference gene:2503576607; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein [...]
     
 0.454
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.