STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06759.1Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (305 aa)    
Predicted Functional Partners:
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.996
AEB07072.1
NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: apv:Apar_0756 NLP/P60 protein; PFAM: NLP/P60 protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575762; PFAM: NlpC/P60 family.
 
  
 0.719
smpB
SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]
  
  
 0.641
AEB06756.1
COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: apv:Apar_0333 transketolase domain protein; PFAM: Transketolase domain-containing protein; PRIAM: Transketolase; SPTR: Transketolase domain protein; IMG reference gene:2503575429; PFAM: Transketolase, thiamine diphosphate binding domain.
       0.591
AEB06757.1
COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR020826:IPR005475:IPR005476; KEGG: apv:Apar_0334 transketolase central region; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Transketolase; IMG reference gene:2503575430; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
       0.591
AEB07755.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001182:IPR005311:IPR001460; KEGG: apv:Apar_1344 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; cell cycle protein; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576476; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; Cell cycle protein; Belongs to the SEDS family.
 
  
 0.575
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.541
AEB06333.1
Hypothetical protein; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR006311; KEGG: apv:Apar_1075 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574985.
 
  
 0.522
AEB06760.1
Tetratricopeptide domain protein; InterPro IPR019734:IPR013026; KEGG: apv:Apar_1273 tetratricopeptide domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575433.
       0.498
AEB06870.1
COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460; KEGG: apv:Apar_0480 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; SPTR: Putative uncharacterized protein; IMG reference gene:2503575545; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain.
 
  
 0.496
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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