STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06791.1COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: pfr:PFREUD_01450 cell envelope-related function transcriptional attenuator common domain; PFAM: cell envelope-related transcriptional attenuator; SPTR: Cell envelope-related function transcriptional attenuator common domain; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; IMG reference gene:2503575466; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain. (418 aa)    
Predicted Functional Partners:
AEB07131.1
KEGG: apv:Apar_0809 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575821.
 
     0.689
AEB07283.1
Capsular exopolysaccharide family; COGs: COG3944 Capsular polysaccharide biosynthesis protein; InterPro IPR005702:IPR003856; KEGG: cms:CMS_2399 putative surface polysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; TIGRFAM: capsular exopolysaccharide family; IMG reference gene:2503575984; PFAM: Chain length determinant protein; TIGRFAM: capsular exopolysaccharide family.
  
  
 0.666
AEB07620.1
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: bpy:Bphyt_0294 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein; IMG reference gene:2503576340; PFAM: ABC 3 transport family.
 
   
 0.591
AEB07222.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.568
AEB07621.1
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: afr:AFE_0603 cation ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Cation ABC transporter, ATP-binding protein, putative; IMG reference gene:2503576341; PFAM: ABC transporter.
 
     0.566
AEB07622.1
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterProIPR018120:IPR006128:IPR006311:IPR017909:IPR 006127; KEGG: afr:AFE_0602 cation ABC transporter, periplasmic cation-binding protein, putative; PFAM: periplasmic solute binding protein; SPTR: Cation ABC transporter, periplasmic cation-binding protein, putative; IMG reference gene:2503576342; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.
 
   
 0.557
AEB07755.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001182:IPR005311:IPR001460; KEGG: apv:Apar_1344 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; cell cycle protein; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576476; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; Cell cycle protein; Belongs to the SEDS family.
 
  
 0.536
AEB06330.1
InterPro IPR002477; KEGG: apv:Apar_0344 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan-binding domain 1 protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574982; PFAM: Putative peptidoglycan binding domain.
 
   
 0.504
AEB07220.1
KEGG: bde:BDP_2053 dTDP-rhamnosyl transferase RfbF; SPTR: Putative uncharacterized protein; IMG reference gene:2503575916.
 
   
 0.438
AEB06793.1
Ribonucleoside-triphosphate reductase class III activase subunit; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
     
 0.432
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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