STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06811.1KEGG: ele:Elen_1466 YolD-like protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575486. (164 aa)    
Predicted Functional Partners:
AEB06812.1
COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR017963:IPR001126; KEGG: ele:Elen_1465 UMUC domain protein DNA-repair protein; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575487; PFAM: IMS family HHH motif; impB/mucB/samB family.
 
    0.967
AEB07682.1
Hypothetical protein; InterPro IPR013838; KEGG: ele:Elen_2748 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576402.
 
     0.588
AEB07884.1
COGs: COG4509 conserved hypothetical protein; KEGG: ele:Elen_0908 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576613; PFAM: Sortase family.
 
     0.548
AEB06491.1
Regulatory protein MarR; InterPro IPR000835; KEGG: sga:GALLO_1286 putative transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Putative uncharacterized protein; IMG reference gene:2503575152.
  
     0.490
AEB06613.1
Transcriptional regulator, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR018060:IPR013096:IPR000005; KEGG: clj:CLJU_c13540 putative AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family transcriptional regulator; IMG reference gene:2503575279; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
    0.478
AEB06561.1
KEGG: ele:Elen_2186 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575225.
 
     0.473
AEB07883.1
COGs: COG4932 outer membrane protein; InterPro IPR008454; KEGG: ele:Elen_0909 Cna B domain protein; PFAM: Cna B domain protein; SPTR: Cna B domain protein; IMG reference gene:2503576612; PFAM: Cna protein B-type domain.
 
     0.448
AEB07284.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: ele:Elen_1959 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; manually curated; IMG reference gene:2503575985; PFAM: Helix-turn-helix.
 
     0.443
AEB07286.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: ele:Elen_1959 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; manually curated; IMG reference gene:2503575987; PFAM: Helix-turn-helix.
 
     0.434
dinB
DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
  
    0.430
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.