STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcACOGs: COG2235 Arginine deiminase; InterPro IPR003876:IPR003198; KEGG: shi:Shel_02360 arginine deiminase; PFAM: amidinotransferase; PRIAM: Arginine deiminase; SPTR: Arginine deiminase; TIGRFAM: arginine deiminase; IMG reference gene:2503575537; PFAM: Amidinotransferase; TIGRFAM: arginine deiminase. (413 aa)    
Predicted Functional Partners:
AEB06863.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 0.998
argH
COGs: COG0165 Argininosuccinate lyase; InterPro IPR009049:IPR020557:IPR003031:IPR000362; KEGG: ele:Elen_2338 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: Putative uncharacterized protein; TIGRFAM: argininosuccinate lyase; IMG reference gene:2503576013; PFAM: Lyase; TIGRFAM: argininosuccinate lyase.
    
 0.918
AEB07730.1
COGs: COG0549 Carbamate kinase; InterPro IPR003964:IPR000623:IPR001048; KEGG: shi:Shel_05980 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Carbamate kinase; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2503576451; PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase; Belongs to the carbamate kinase family.
 
  
 0.885
AEB07683.1
Aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006132:IPR006131:IPR006130:IPR002292; KEGG: ele:Elen_0676 putrescine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; SPTR: Ornithine carbamoyltransferase; IMG reference gene:2503576403; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoy [...]
 
  
 0.622
AEB06418.1
Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR004841:IPR002293; KEGG: tde:TDE0445 amino acid permease; PFAM: amino acid permease-associated region; SPTR: Amino acid permease; IMG reference gene:2503575075; PFAM: Amino acid permease; TC 2.A.3.
  
  
 0.511
AEB06856.1
Phosphate acetyltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR012147:IPR002505:IPR004614; KEGG: apv:Apar_0646 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; PRIAM: Phosphate acetyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: phosphate acetyltransferase; IMG reference gene:2503575531; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase.
  
  
 0.503
AEB06770.1
Iron-containing alcohol dehydrogenase; COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family; InterPro IPR018211:IPR001670; KEGG: shi:Shel_07410 Fe-dependent oxidoreductase, alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575443; PFAM: Iron-containing alcohol dehydrogenase.
   
    0.495
AEB06200.1
COGs: COG2388 acetyltransferase; KEGG: lcz:LCAZH_2300 putative acetyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503574844; PFAM: Acetyltransferase (GNAT) family.
   
    0.465
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
     
 0.456
AEB06817.1
C4-dicarboxylate anaerobic carrier; COGs: COG1288 membrane protein; InterPro IPR018385; KEGG: cdl:CDR20291_1606 putative C4-dicarboxylate anaerobic carrier; PFAM: C4-dicarboxylate anaerobic carrier-like; SPTR: Putative uncharacterized protein; IMG reference gene:2503575492; PFAM: C4-dicarboxylate anaerobic carrier.
 
   
 0.455
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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