STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06891.1Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR012770; KEGG: apv:Apar_1334 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Trehalose operon repressor; TIGRFAM: trehalose operon repressor; IMG reference gene:2503575566; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: trehalose operon repressor, B. subtilis-type. (256 aa)    
Predicted Functional Partners:
AEB06892.1
PTS system, trehalose-specific IIBC subunit; COGs: COG1263 Phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterProIPR001996:IPR013013:IPR018113:IPR003352:IPR 011296:IPR011535; KEGG: cbe:Cbei_2320 PTS system, trehalose-specific IIBC subunit; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: PTS system, trehalose-specific, IIBC component; TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint [...]
 
  
 0.893
AEB06573.1
Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: esi:Exig_0480 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH; SPTR: Putative uncharacterized protein; IMG reference gene:2503575237; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
     0.708
AEB06572.1
Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: eat:EAT1b_2257 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2503575236; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
     0.679
AEB07813.1
Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: bha:BH3323 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Putative uncharacterized protein; IMG reference gene:2503576537; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
     0.667
AEB06893.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: apv:Apar_1336 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Trehalose-6-phosphate hydrolase; IMG reference gene:2503575568; PFAM: Alpha amylase, catalytic domain; TIGRFAM: alpha,alpha-phosphotrehalase.
 
  
 0.662
AEB06469.1
PTS system, glucose-like IIB subunint; COGs: COG1263 Phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterProIPR001996:IPR013013:IPR018113:IPR003352:IPR 018114:IPR011535; KEGG: ddc:Dd586_0344 PTS system, sucrose-specific IIBC subunit; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Putative uncharacterized protein; TIGRFAM: PTS system, glucose-like IIB subunint; IMG reference gene:2503575129; PFAM: Phosphotransferase system, [...]
 
  
 0.659
AEB06224.1
Helix-turn-helix domain protein; InterPro IPR001387:IPR013096; KEGG: cbl:CLK_0680 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574870; PFAM: Cupin domain; Helix-turn-helix.
  
  
 0.563
AEB06613.1
Transcriptional regulator, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR018060:IPR013096:IPR000005; KEGG: clj:CLJU_c13540 putative AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family transcriptional regulator; IMG reference gene:2503575279; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
  
 0.550
AEB07640.1
Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: sss:SSUSC84_0386 GntR family regulatory protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Putative uncharacterized protein; IMG reference gene:2503576360; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
     0.543
AEB06528.1
COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; InterPro IPR006680:IPR003764; KEGG: apv:Apar_1061 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: Putative uncharacterized protein; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; IMG reference gene:2503575192; PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.519
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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