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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06917.1Abortive infection protein; InterPro IPR003675; KEGG: cpr:CPR_0234 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575596; PFAM: CAAX amino terminal protease family. (334 aa)    
Predicted Functional Partners:
AEB06204.1
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: sab:SAB2397c NADH-dependent flavin reductase; PFAM: nitroreductase; SPTR: Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase; IMG reference gene:2503574848; PFAM: Nitroreductase family.
  
  
 0.570
AEB06843.1
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: dap:Dacet_1946 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; IMG reference gene:2503575518; PFAM: Nitroreductase family.
  
  
 0.570
AEB06293.1
KEGG: ele:Elen_0562 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574941.
  
  
 0.565
AEB06294.1
ABC-2 type transporter; InterPro IPR013525; KEGG: ele:Elen_0561 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; IMG reference gene:2503574942; PFAM: ABC-2 type transporter.
  
  
 0.565
AEB07081.1
Protein of unknown function DUF1624; COGs: COG3503 membrane protein; InterPro IPR012429; KEGG: apv:Apar_0771 protein of unknown function DUF1624; PFAM: protein of unknown function DUF1624; SPTR: Putative uncharacterized protein; IMG reference gene:2503575771; PFAM: Protein of unknown function (DUF1624).
  
    0.536
AEB06916.1
COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR014362:IPR006095:IPR006097:IPR006096; KEGG: ccu:Ccur_07080 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: Glutamate dehydrogenase (NADP); IMG reference gene:2503575595; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.480
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
     
 0.455
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
  
 0.451
clpP
ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
     
 0.404
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.