STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06929.1Cys/Met metabolism pyridoxal-phosphate-dependent protein; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR006650:IPR000277; KEGG: xce:Xcel_2638 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575609; PFAM: Cys/Met metabolism PLP-dependent enzyme. (369 aa)    
Predicted Functional Partners:
AEB06737.1
COGs: COG0031 Cysteine synthase; InterPro IPR001216:IPR001926:IPR005856:IPR005859; KEGG: shi:Shel_04800 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; IMG reference gene:2503575410; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.945
AEB06322.1
Homocysteine S-methyltransferase; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: sth:STH2500 5-methyltetrahydrofolate S-homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503574970; PFAM: Homocysteine S-methyltransferase.
  
 
 0.927
AEB07242.1
COGs: COG0520 Selenocysteine lyase; InterPro IPR010970:IPR000192; KEGG: ele:Elen_2273 cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SPTR: Putative uncharacterized protein; TIGRFAM: cysteine desulfurase, SufS subfamily; IMG reference gene:2503575939; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.924
AEB06214.1
COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544:IPR005786; KEGG: ccu:Ccur_08670 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Putative uncharacterized protein; TIGRFAM: branched-chain amino acid aminotransferase; IMG reference gene:2503574858; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II.
  
 
 0.913
AEB06233.1
Cys/Met metabolism pyridoxal-phosphate-dependent protein; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: efa:EF3284 cystathionine gamma-synthase, putative; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Putative cystathionine gamma-synthase; IMG reference gene:2503574880; PFAM: Cys/Met metabolism PLP-dependent enzyme.
 
  
 0.833
AEB06353.1
COGs: COG1882 Pyruvate-formate lyase; InterPro IPR019777:IPR004184:IPR001150:IPR010098; KEGG: cbe:Cbei_0705 pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Pyruvate formate-lyase; TIGRFAM: pyruvate formate-lyase; IMG reference gene:2503575005; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase.
    
 0.820
AEB06610.1
COGs: COG1882 Pyruvate-formate lyase; InterPro IPR001150:IPR004184:IPR019777:IPR010098; KEGG: ect:ECIAI39_3038 putative formate acetyltransferase 2; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Pyruvate formate-lyase; TIGRFAM: pyruvate formate-lyase; IMG reference gene:2503575275; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase.
    
 0.820
AEB07675.1
Formate C-acetyltransferase glycine radical; COGs: COG1882 Pyruvate-formate lyase; InterPro IPR001150:IPR019777; KEGG: apv:Apar_0655 autonomous glycyl radical cofactor GrcA; PFAM: formate C-acetyltransferase glycine radical; SPTR: Putative uncharacterized protein; IMG reference gene:2503576395; PFAM: Glycine radical.
    
 0.820
AEB07676.1
COGs: COG1882 Pyruvate-formate lyase; InterPro IPR005949:IPR004184:IPR001150; KEGG: apv:Apar_0656 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: formate acetyltransferase; IMG reference gene:2503576396; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1.
    
 0.820
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
    
 0.816
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.