STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07056.1KEGG: blj:BLD_0271 membrane protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575746. (214 aa)    
Predicted Functional Partners:
AEB07055.1
Peptidase M20; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: sth:STH1479 putative peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575745; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain.
       0.540
AEB06223.1
KEGG: psl:Psta_2516 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574869.
  
 
 0.409
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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