STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07069.1Regulatory protein MerR; InterPro IPR000551; KEGG: apv:Apar_0754 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Putative uncharacterized protein; IMG reference gene:2503575759; PFAM: MerR family regulatory protein. (294 aa)    
Predicted Functional Partners:
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.966
AEB07068.1
COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: apv:Apar_0753 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575758; PFAM: FHA domain.
 
  
 0.900
AEB07343.1
InterPro IPR002645:IPR003594; KEGG: apv:Apar_0915 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; ATP-binding region ATPase domain protein; SPTR: Anti-sigma factor antagonist; IMG reference gene:2503576052; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; STAS domain; TIGRFAM: anti-anti-sigma factor.
 
  
 0.794
AEB06942.1
Heat shock protein DnaJ domain protein; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR001623:IPR001305:IPR003095:IPR018253:IPR 002939; KEGG: apv:Apar_0797 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; DnaJ central domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575622; PFAM: DnaJ central domain (4 repeats); DnaJ domain.
 
 
 0.786
AEB06265.1
COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR018253:IPR001623:IPR002939:IPR003095; KEGG: apv:Apar_0096 chaperone DnaJ domain protein; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574912; PFAM: DnaJ C terminal region; DnaJ domain.
 
 
 0.772
AEB06408.1
InterPro IPR006058:IPR017900:IPR017896; KEGG: apv:Apar_0185 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575061.
 
 
 
 0.771
AEB07255.1
KEGG: apv:Apar_0877 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575954.
 
     0.757
AEB07505.1
Haloacid dehalogenase domain protein hydrolase type 3; COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200; KEGG: fal:FRAAL6699 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: Putative uncharacterized protein; IMG reference gene:2503576221; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB.
 
     0.756
AEB07131.1
KEGG: apv:Apar_0809 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575821.
 
    0.737
dnaJ
Heat shock protein DnaJ domain protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions [...]
  
 
 0.731
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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