STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07081.1Protein of unknown function DUF1624; COGs: COG3503 membrane protein; InterPro IPR012429; KEGG: apv:Apar_0771 protein of unknown function DUF1624; PFAM: protein of unknown function DUF1624; SPTR: Putative uncharacterized protein; IMG reference gene:2503575771; PFAM: Protein of unknown function (DUF1624). (244 aa)    
Predicted Functional Partners:
lexA
SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
       0.791
AEB06917.1
Abortive infection protein; InterPro IPR003675; KEGG: cpr:CPR_0234 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575596; PFAM: CAAX amino terminal protease family.
  
    0.536
AEB07079.1
Peptidoglycan-binding lysin domain protein; InterPro IPR018392; KEGG: apv:Apar_0769 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; IMG reference gene:2503575769; PFAM: LysM domain.
       0.529
AEB07728.1
KEGG: apv:Apar_1108 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576449.
 
    0.419
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.