STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nusBNusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (198 aa)    
Predicted Functional Partners:
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 
 0.977
rpsJ
SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
 
 0.906
AEB07099.1
COGs: COG1189 rRNA methylase; InterPro IPR004538:IPR002877; KEGG: apv:Apar_0472 hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; SPTR: Putative uncharacterized protein; TIGRFAM: hemolysin A; IMG reference gene:2503575789; PFAM: FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein.
 
  
 0.852
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
  
 
 0.849
efp
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
  
 0.841
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
 0.837
AEB07102.1
KEGG: apv:Apar_0469 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575792; PFAM: Protein of unknown function (DUF322).
  
    0.835
AEB07097.1
DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA.
     
 0.811
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
    0.807
AEB07100.1
Exonuclease VII small subunit; InterPro IPR003761; KEGG: apv:Apar_0471 hypothetical protein; PFAM: Exonuclease VII small subunit; SPTR: Putative uncharacterized protein; IMG reference gene:2503575790; PFAM: Exonuclease VII small subunit.
       0.791
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.