STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07117.1Peptidase A24A prepilin type IV; InterPro IPR000045; KEGG: hmo:HM1_0253 peptidase a24a, prepilin type IV peptidase; PFAM: peptidase A24A prepilin type IV; SPTR: Putative uncharacterized protein; IMG reference gene:2503575807; PFAM: Type IV leader peptidase family. (154 aa)    
Predicted Functional Partners:
AEB07118.1
KEGG: shi:Shel_09860 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575808.
       0.785
AEB06936.1
DNA internalization-related competence protein ComEC/Rec2; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004477:IPR004797; KEGG: apv:Apar_0804 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; IMG reference gene:2503575616; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.767
AEB06994.1
SMF family protein; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: apv:Apar_0702 smf family protein; PFAM: SMF family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575675; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA.
  
  
 0.637
AEB06935.1
Competence protein ComEA helix-hairpin-helix repeat protein; COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR003583:IPR019554:IPR000445:IPR004509; KEGG: ach:Achl_1982 competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: Putative uncharacterized protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; IMG reference gene:2503575615; PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein ComEA h [...]
  
  
 0.611
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
  
 0.566
AEB07116.1
Metal-dependent phosphohydrolase HD sub domain protein; COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR003607:IPR006674; KEGG: apv:Apar_0451 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Putative uncharacterized protein; IMG reference gene:2503575806; PFAM: HD domain; Belongs to the dGTPase family. Type 2 subfamily.
       0.557
AEB07119.1
COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB; InterPro IPR004701:IPR004720; KEGG: efa:EF0020 PTS system, mannose-specific IIAB components; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575809; PFAM: PTS system fructose IIA component; PTS system sorbose subfamily IIB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA component; PTS system, [...]
     
 0.527
AEB06307.1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.504
AEB07709.1
COGs: COG0554 Glycerol kinase; InterPro IPR018483:IPR018484:IPR018485; KEGG: cth:Cthe_2442 carbohydrate kinase, FGGY; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Putative uncharacterized protein; IMG reference gene:2503576429; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase.
  
  
 0.504
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
    0.497
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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