STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07143.1ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: apv:Apar_0816 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575833; PFAM: ABC transporter. (259 aa)    
Predicted Functional Partners:
AEB07144.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525:IPR000412; KEGG: apv:Apar_0602 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; IMG reference gene:2503575834; PFAM: ABC-2 type transporter.
 
 0.999
AEB07226.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: ele:Elen_2042 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2503575923; PFAM: Glycosyl transferase family 2.
 
  
 0.838
AEB07298.1
COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835:IPR013096; KEGG: pdi:BDI_3226 mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-6-phosphate isomerase mannose-1-phosphate guanylyl transferase; IMG reference gene:2503576002; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase.
  
  
 0.722
AEB07221.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ele:Elen_2052 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2503575917; PFAM: Glycosyl transferase family 2.
 
  
 0.658
AEB06519.1
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: ele:Elen_1536 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575183; PFAM: ABC transporter.
      0.584
AEB06857.1
COGs: COG0562 UDP-galactopyranose mutase; InterPro IPR006076:IPR015899:IPR004379; KEGG: apv:Apar_0647 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD dependent oxidoreductase; PRIAM: UDP-galactopyranose mutase; SPTR: Putative uncharacterized protein; TIGRFAM: UDP-galactopyranose mutase; IMG reference gene:2503575532; PFAM: UDP-galactopyranose mutase; FAD dependent oxidoreductase; TIGRFAM: UDP-galactopyranose mutase.
  
  
 0.579
AEB07222.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.577
AEB07220.1
KEGG: bde:BDP_2053 dTDP-rhamnosyl transferase RfbF; SPTR: Putative uncharacterized protein; IMG reference gene:2503575916.
 
  
 0.561
AEB06831.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: bad:BAD_0958 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; IMG reference gene:2503575506; PFAM: Glycosyl transferase family 2.
  
  
 0.554
sigA
RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
  
 0.546
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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