STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (724 aa)    
Predicted Functional Partners:
AEB07178.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.997
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.997
glgC
Nucleotidyl transferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 0.983
AEB07315.1
COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: ere:EUBREC_1840 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; IMG reference gene:2503576020; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
 
 
 0.972
AEB07180.1
Glucose-1-phosphate adenylyltransferase, GlgD subunit; COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR011832; KEGG: apv:Apar_1048 glucose-1-phosphate adenylyltransferase, GlgD subunit; PRIAM: Glucose-1-phosphate adenylyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; IMG reference gene:2503575871; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit.
 
  
 0.953
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 0.915
AEB07231.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: san:gbs1480 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; manually curated; IMG reference gene:2503575928; PFAM: Glycosyl transferases group 1.
  
 0.908
AEB07296.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nmu:Nmul_A0170 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; IMG reference gene:2503576000; PFAM: Glycosyl transferases group 1.
  
 0.908
AEB07295.1
KEGG: bcz:BCZK0795 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2503575999.
  
 0.883
AEB07182.1
COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385:IPR006589:IPR006047; KEGG: apv:Apar_1046 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Putative uncharacterized protein; TIGRFAM: 4-alpha-glucanotransferase; IMG reference gene:2503575873; PFAM: 4-alpha-glucanotransferase; Alpha amylase, catalytic domain; TIGRFAM: 4-alpha-glucanotransferase.
 
  
 0.857
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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