STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07239.1Iron-regulated ABC transporter ATPase subunit SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR010230:IPR003439; KEGG: ele:Elen_2270 FeS assembly ATPase SufC; PFAM: ABC transporter related; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly ATPase SufC; IMG reference gene:2503575936; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC. (280 aa)    
Predicted Functional Partners:
AEB07240.1
Iron-regulated ABC transporter membrane component SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231:IPR000825; KEGG: ele:Elen_2271 FeS assembly protein SufB; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly protein SufB; IMG reference gene:2503575937; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 0.999
AEB07242.1
COGs: COG0520 Selenocysteine lyase; InterPro IPR010970:IPR000192; KEGG: ele:Elen_2273 cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SPTR: Putative uncharacterized protein; TIGRFAM: cysteine desulfurase, SufS subfamily; IMG reference gene:2503575939; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.997
AEB07241.1
SufBD protein; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: ele:Elen_2272 SufBD protein; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575938; PFAM: Uncharacterized protein family (UPF0051).
 
 
 0.985
AEB07243.1
SUF system FeS assembly protein, NifU family; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR011341:IPR002871; KEGG: shi:Shel_26820 SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; SPTR: SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family; IMG reference gene:2503575940; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family.
 
  
 0.947
AEB07245.1
NifU-like domain-containing protein; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; KEGG: cac:CA_C2565 NifU-like domain-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575944.
  
  
 0.632
AEB07238.1
Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ele:Elen_2269 transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; SPTR: Putative uncharacterized protein; TIGRFAM: transcriptional regulator, Rrf2 family; IMG reference gene:2503575935; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein.
     
 0.587
AEB07236.1
COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterPro IPR017900:IPR004108:IPR017896; KEGG: apv:Apar_0411 ferredoxin hydrogenase; PFAM: hydrogenase large subunit domain protein; SPTR: Ferredoxin hydrogenase; IMG reference gene:2503575933; PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain.
  
    0.561
AEB07235.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ele:Elen_2037 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2503575932; PFAM: Glycosyl transferase family 2.
     
 0.529
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
  
  
 0.519
AEB07237.1
Hypothetical protein; KEGG: gdj:Gdia_1899 phosphoenolpyruvate-protein phosphotransferase; IMG reference gene:2503575934.
       0.503
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.