STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07245.1NifU-like domain-containing protein; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; KEGG: cac:CA_C2565 NifU-like domain-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575944. (244 aa)    
Predicted Functional Partners:
AEB07024.1
COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR016454:IPR000192; KEGG: apv:Apar_0732 aminotransferase class V; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575710; PFAM: Aminotransferase class-V.
  
 0.977
AEB07244.1
KEGG: cno:NT01CX_0217 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575943.
 
    0.951
AEB07242.1
COGs: COG0520 Selenocysteine lyase; InterPro IPR010970:IPR000192; KEGG: ele:Elen_2273 cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SPTR: Putative uncharacterized protein; TIGRFAM: cysteine desulfurase, SufS subfamily; IMG reference gene:2503575939; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.874
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.830
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
     
 0.748
AEB06394.1
COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: shi:Shel_15130 thioredoxin-like protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575047; PFAM: NifU-like domain.
  
 
 0.693
AEB07239.1
Iron-regulated ABC transporter ATPase subunit SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR010230:IPR003439; KEGG: ele:Elen_2270 FeS assembly ATPase SufC; PFAM: ABC transporter related; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly ATPase SufC; IMG reference gene:2503575936; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.
  
  
 0.632
AEB07240.1
Iron-regulated ABC transporter membrane component SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231:IPR000825; KEGG: ele:Elen_2271 FeS assembly protein SufB; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly protein SufB; IMG reference gene:2503575937; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
  
  
 0.583
AEB07241.1
SufBD protein; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: ele:Elen_2272 SufBD protein; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575938; PFAM: Uncharacterized protein family (UPF0051).
  
  
 0.583
AEB06738.1
Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: eel:EUBELI_00637 cysteine desulfurase; PFAM: protein of unknown function UPF0074; SPTR: Putative uncharacterized protein; TIGRFAM: transcriptional regulator, Rrf2 family; IMG reference gene:2503575411; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein.
  
  
 0.558
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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