STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07270.1Desulfoferrodoxin ferrous iron-binding region; COGs: COG2033 Desulfoferrodoxin; InterPro IPR002742; KEGG: cac:CA_C2450 desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; SPTR: Putative uncharacterized protein; IMG reference gene:2503575969; PFAM: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain. (120 aa)    
Predicted Functional Partners:
AEB06594.1
Ferritin Dps family protein; Iron-storage protein.
 
  
 0.747
AEB06495.1
Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254:IPR016440; KEGG: apv:Apar_0063 beta-lactamase domain protein; PFAM: flavodoxin/nitric oxide synthase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575156; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin.
 
  
 0.714
AEB07719.1
Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR004039:IPR009040:IPR003251; KEGG: apv:Apar_0122 rubrerythrin; PFAM: Rubrerythrin; SPTR: Putative uncharacterized protein; IMG reference gene:2503576439; PFAM: Rubrerythrin.
 
  
 0.670
AEB06763.1
InterPro IPR004039; KEGG: apv:Apar_1271 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2503575436; PFAM: Rubredoxin.
  
  
 0.637
AEB07269.1
Hypothetical protein; KEGG: sma:SAV_5948 NH(3)-dependent NAD(+) synthetase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575968; PFAM: NAD synthase.
       0.577
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
  
  
 0.506
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
  
 0.503
AEB07271.1
Hypothetical protein; KEGG: syf:Synpcc7942_2119 RNA methyltransferase TrmH, group 3; SPTR: Putative uncharacterized protein; IMG reference gene:2503575970.
       0.456
AEB07116.1
Metal-dependent phosphohydrolase HD sub domain protein; COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR003607:IPR006674; KEGG: apv:Apar_0451 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Putative uncharacterized protein; IMG reference gene:2503575806; PFAM: HD domain; Belongs to the dGTPase family. Type 2 subfamily.
 
     0.453
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.427
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.