STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07287.1YdjC family protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: bcl:ABC2079 hypothetical protein; PFAM: YdjC family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575988; PFAM: YdjC-like protein. (74 aa)    
Predicted Functional Partners:
AEB07667.1
Glycoside hydrolase family 4; COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase; InterPro IPR019802:IPR001088; KEGG: cbe:Cbei_4847 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 4; SPTR: 6-phospho-beta-glucosidase; IMG reference gene:2503576387; PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain.
 
  
 0.630
AEB07275.1
COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA; InterPro IPR003188; KEGG: lin:lin0917 hypothetical protein; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; SPTR: PTS system, beta-glucoside-specific, IIA component; IMG reference gene:2503575975; PFAM: PTS system, Lactose/Cellobiose specific IIA subunit.
 
   
 0.532
AEB06361.1
KEGG: eel:EUBELI_00627 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575013.
  
  
 0.512
AEB07288.1
Glycoside hydrolase family 4; COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase; InterPro IPR001088; KEGG: str:Sterm_4107 glycoside hydrolase family 4; PFAM: glycoside hydrolase family 4; SPTR: Putative uncharacterized protein; IMG reference gene:2503575990; PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain.
 
  
 0.492
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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