STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07290.1ADP-ribosylation/Crystallin J1; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: lmy:LM5923_0073 hypothetical protein; PFAM: ADP-ribosylation/Crystallin J1; SPTR: BvrC; IMG reference gene:2503575992; PFAM: ADP-ribosylglycohydrolase. (336 aa)    
Predicted Functional Partners:
AEB07291.1
Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: clj:CLJU_c24980 putative transporter protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; IMG reference gene:2503575993; PFAM: Major Facilitator Superfamily.
       0.776
AEB07289.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002139:IPR011611; KEGG: pap:PSPA7_3342 ribokinase; PFAM: PfkB domain protein; SPTR: Possible ribokinase; IMG reference gene:2503575991; PFAM: pfkB family carbohydrate kinase.
     
 0.738
AEB07288.1
Glycoside hydrolase family 4; COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase; InterPro IPR001088; KEGG: str:Sterm_4107 glycoside hydrolase family 4; PFAM: glycoside hydrolase family 4; SPTR: Putative uncharacterized protein; IMG reference gene:2503575990; PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain.
       0.437
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.