STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07310.1InterPro IPR002528; KEGG: cbe:Cbei_3145 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Putative uncharacterized protein; IMG reference gene:2503576014; PFAM: MatE. (224 aa)    
Predicted Functional Partners:
AEB07356.1
COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020830:IPR020832:IPR006424:IPR020828:IPR 020829:IPR020831; KEGG: cbt:CLH_2814 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase (Phosphorylating); TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; IMG reference gene:2503576066; PFAM: G [...]
  
  
 0.577
AEB07311.1
Methyltransferase type 11; InterPro IPR013216; KEGG: ctc:CTC02188 methyltransferase, putative 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; IMG reference gene:2503576015; PFAM: Methyltransferase domain.
  
  
 0.568
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.558
AEB07306.1
COGs: COG0539 Ribosomal protein S1; InterPro IPR000110:IPR003029; KEGG: apv:Apar_0962 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576010; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1.
  
    0.528
argH
COGs: COG0165 Argininosuccinate lyase; InterPro IPR009049:IPR020557:IPR003031:IPR000362; KEGG: ele:Elen_2338 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: Putative uncharacterized protein; TIGRFAM: argininosuccinate lyase; IMG reference gene:2503576013; PFAM: Lyase; TIGRFAM: argininosuccinate lyase.
       0.508
pheT
COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR004532:IPR002547:IPR005121:IPR005146:IPR 005147; KEGG: apv:Apar_1054 phenylalanyl-tRNA synthetase, beta subunit; PFAM: B3/4 domain protein; t-RNA-binding domain-containing protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Putative uncharacterized protein; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; IMG reference gene:2503576306; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta su [...]
     
 0.470
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
  
 0.432
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.431
AEB06569.1
InterPro IPR011701; KEGG: rsl:RPSI07_mp0928 putative major facilitator superfamily multidrug transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503575233; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
  
  
 0.431
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.