STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07321.1Glycoside hydrolase family 29 (alpha-L-fucosidase); COGs: COG3669 Alpha-L-fucosidase; InterPro IPR016286:IPR000933; KEGG: cpy:Cphy_2190 alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; IMG reference gene:2503576026; PFAM: Alpha-L-fucosidase. (440 aa)    
Predicted Functional Partners:
AEB07856.1
Glycoside hydrolase family 29 (alpha-L-fucosidase); COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR016286; KEGG: pru:PRU_1164 alpha-L-fucosidase family protein; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; IMG reference gene:2503576581; PFAM: Alpha-L-fucosidase.
  
  
 
0.925
AEB07320.1
InterPro IPR002931; KEGG: cpy:Cphy_2186 transglutaminase domain-containing protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase-like superfamily; IMG reference gene:2503576025; PFAM: Transglutaminase-like superfamily.
 
     0.865
AEB06229.1
Glycoside hydrolase family 2 TIM barrel; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR000629:IPR006101:IPR006104:IPR006102:IPR 006103:IPR004199; KEGG: blt:Balat_0268 beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; SPTR: Beta-galactosidase; IMG reference gene:2503574875; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain [...]
 
   
 0.535
AEB07635.1
COGs: COG1874 Beta-galactosidase; InterPro IPR001944; KEGG: smb:smi_0079 beta-galactosidase 3; PFAM: glycoside hydrolase family 35; PRIAM: Beta-galactosidase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576355; PFAM: Glycosyl hydrolases family 35.
 
  
 0.495
AEB07322.1
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR006311:IPR000914:IPR017909; KEGG: clo:HMPREF0868_1083 bacterial extracellular solute-binding protein, family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein family 5; IMG reference gene:2503576027; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.436
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
   
 0.418
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.