STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07340.1Protein of unknown function DUF188; COGs: COG1671 conserved hypothetical protein; InterPro IPR003791; KEGG: ele:Elen_1794 protein of unknown function DUF188; PFAM: protein of unknown function DUF188; SPTR: Putative uncharacterized protein; IMG reference gene:2503576045; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; Belongs to the UPF0178 family. (172 aa)    
Predicted Functional Partners:
AEB07371.1
HI0933 family protein; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: ele:Elen_1017 HI0933 family protein; PFAM: HI0933 family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576081; PFAM: HI0933-like protein.
 
     0.486
AEB07339.1
Amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650:IPR017439; KEGG: amt:Amet_2941 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: amidohydrolase; IMG reference gene:2503576044; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase.
       0.454
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.