STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07399.1Glycosyl transferase family 2; InterPro IPR001173; KEGG: tbd:Tbd_1783 glucosyltransferase protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase involved in cell wall biogenesis; IMG reference gene:2503576109; PFAM: Glycosyl transferase family 2. (382 aa)    
Predicted Functional Partners:
AEB07398.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: apv:Apar_1220 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; IMG reference gene:2503576108; PFAM: Bacterial regulatory proteins, lacI family; family.
  
  
 0.792
AEB06858.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: apv:Apar_0648 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; IMG reference gene:2503575533; PFAM: Glycosyl transferase family 2.
 
     0.555
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
    0.509
AEB07222.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.481
AEB07401.1
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR017871:IPR003439:IPR003339:IPR003593; KEGG: bll:BLJ_1432 fused ATP-binding protein and permease of ABC transporter; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576111; PFAM: ABC transporter; Cobalt transport protein.
     
 0.457
AEB06857.1
COGs: COG0562 UDP-galactopyranose mutase; InterPro IPR006076:IPR015899:IPR004379; KEGG: apv:Apar_0647 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD dependent oxidoreductase; PRIAM: UDP-galactopyranose mutase; SPTR: Putative uncharacterized protein; TIGRFAM: UDP-galactopyranose mutase; IMG reference gene:2503575532; PFAM: UDP-galactopyranose mutase; FAD dependent oxidoreductase; TIGRFAM: UDP-galactopyranose mutase.
 
  
 0.435
AEB07397.1
COGs: COG3957 Phosphoketolase; InterPro IPR019790:IPR018970:IPR005593:IPR018969; KEGG: apv:Apar_1219 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; PRIAM: Fructose-6-phosphate phosphoketolase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576107; PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain.
       0.430
AEB06838.1
COGs: COG3919 ATP-grasp protein; InterPro IPR011761; KEGG: llc:LACR_2532 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575513.
 
     0.410
AEB07144.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525:IPR000412; KEGG: apv:Apar_0602 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; IMG reference gene:2503575834; PFAM: ABC-2 type transporter.
 
  
 0.403
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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