STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07442.1Hypothetical protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: pzu:PHZ_c2973 beta-lactamase-like protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576152; PFAM: Metallo-beta-lactamase superfamily. (286 aa)    
Predicted Functional Partners:
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.668
AEB07443.1
Tartronate semialdehyde reductase; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR002204:IPR006183:IPR006398:IPR006115; KEGG: ses:SARI_04369 tartronate semialdehyde reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; IMG reference gene:2503576153; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase.
  
  
 0.663
AEB07439.1
KEGG: afn:Acfer_0081 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576149; PFAM: Uncharacterized conserved protein (DUF2088).
 
     0.649
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.640
AEB06512.1
Regulatory protein LuxR; InterPro IPR000792; KEGG: ele:Elen_0181 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Putative uncharacterized protein; IMG reference gene:2503575176; PFAM: Bacterial regulatory proteins, luxR family.
   
 
 0.633
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
   0.628
AEB07441.1
FAD dependent oxidoreductase; COGs: COG0579 dehydrogenase; InterPro IPR006076:IPR007419; KEGG: afn:Acfer_1986 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; SPTR: FAD dependent oxidoreductase; IMG reference gene:2503576151; PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase.
  
  
 0.597
rpsQ
SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.593
AEB06563.1
KEGG: ele:Elen_2184 hypothetical protein; SPTR: Phosphopantetheine attachment site; IMG reference gene:2503575227; PFAM: Phosphopantetheine attachment site.
   
 
 0.587
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.587
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.