STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07451.1Transcriptional regulator, CdaR; COGs: COG3835 Sugar diacid utilization regulator; InterPro IPR008599; KEGG: bde:BDP_1379 transcriptional regulator; PFAM: sugar diacid recognition domain protein; SPTR: Putative carbohydrate diacid regulator; IMG reference gene:2503576161; PFAM: Putative sugar diacid recognition. (389 aa)    
Predicted Functional Partners:
AEB07444.1
COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: vha:VIBHAR_06863 glycerate kinase; PFAM: glycerate kinase; PRIAM: Glycerate kinase; SPTR: Putative uncharacterized protein; TIGRFAM: glycerate kinase; IMG reference gene:2503576154; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.665
AEB07450.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: enc:ECL_00350 aminoalkylphosphonic acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Protein PhnO; IMG reference gene:2503576160; PFAM: Acetyltransferase (GNAT) family.
       0.473
AEB07491.1
Major facilitator superfamily MFS_1; InterPro IPR001411:IPR011701; KEGG: blt:Balat_1502 putative tetracycline resistance protein; PFAM: major facilitator superfamily MFS_1; SPTR: Transporter, major facilitator family; IMG reference gene:2503576206; PFAM: Major Facilitator Superfamily.
  
    0.469
AEB07449.1
COGs: COG2721 Altronate dehydratase; InterPro IPR017654:IPR013974:IPR007392; KEGG: afn:Acfer_0082 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; PRIAM: Galactarate dehydratase; SPTR: Galactarate dehydratase; TIGRFAM: galactarate dehydratase; IMG reference gene:2503576159; PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus; SAF domain; TIGRFAM: galactarate dehydratase.
  
    0.429
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.