STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07460.1KEGG: dma:DMR_00230 hypothetical protein; SPTR: Iron-sulfur flavoprotein; IMG reference gene:2503576170. (442 aa)    
Predicted Functional Partners:
AEB07458.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: ele:Elen_2391 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576168; PFAM: Helix-turn-helix.
 
   
 0.809
AEB07459.1
KEGG: ele:Elen_2390 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576169.
       0.774
AEB06161.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR010499; KEGG: dhd:Dhaf_2598 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription activator effector binding; SMART: regulatory protein MerR; SPTR: Transcriptional regulator; IMG reference gene:2503574802; PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain.
 
  
 0.573
AEB07887.1
KEGG: apv:Apar_1356 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576616.
  
  
 0.550
AEB06252.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: ctc:CTC01842 putative regulator of efflux transporter; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; IMG reference gene:2503574899; PFAM: MerR, DNA binding; MerR family regulatory protein.
 
  
 0.531
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
  
  
 0.465
AEB06704.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: san:gbs0028 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575373.
 
    0.432
AEB06354.1
Transaldolase; COGs: COG0176 Transaldolase; InterPro IPR018225:IPR001585; KEGG: clj:CLJU_c25960 transaldolase; PFAM: Transaldolase; PRIAM: Transaldolase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575006; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family.
  
    0.408
AEB06790.1
Transaldolase; COGs: COG0176 Transaldolase; InterPro IPR001585; KEGG: apv:Apar_0332 transaldolase; PFAM: Transaldolase; SPTR: Transaldolase; IMG reference gene:2503575465; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family.
  
    0.408
AEB07202.1
Transaldolase; COGs: COG0176 Transaldolase; InterPro IPR001585; KEGG: bmq:BMQ_3648 putative transaldolase; PFAM: Transaldolase; SPTR: Putative transaldolase; IMG reference gene:2503575893; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family.
  
    0.408
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.