STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07549.1Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281; KEGG: cbe:Cbei_4848 RpiR family transcriptional regulator; PFAM: helix-turn-helix protein RpiR; SPTR: Putative uncharacterized protein; IMG reference gene:2503576268; PFAM: Helix-turn-helix domain, rpiR family. (287 aa)    
Predicted Functional Partners:
AEB07045.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000276:IPR000281:IPR001347; KEGG: lrh:LGG_00094 hypothetical protein; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; SPTR: Predicted protein; IMG reference gene:2503575734; PFAM: SIS domain; Helix-turn-helix domain, rpiR family.
  
     0.757
AEB06697.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: sga:GALLO_1621 transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: Transcriptional regulator, RpiR family protein; IMG reference gene:2503575366; PFAM: Helix-turn-helix domain, rpiR family; SIS domain.
  
     0.672
AEB07548.1
Glycoside hydrolase family 1; COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR018120:IPR001360; KEGG: cac:CA_C1405 beta-glucosidase; PFAM: glycoside hydrolase family 1; SPTR: Putative uncharacterized protein; IMG reference gene:2503576267; PFAM: Glycosyl hydrolase family 1.
  
  
 0.548
AEB07760.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: bcl:ABC2085 transcriptional regulator; PFAM: sugar isomerase (SIS); SPTR: Predicted protein; IMG reference gene:2503576481; PFAM: SIS domain; Helix-turn-helix domain, rpiR family.
  
     0.517
AEB07667.1
Glycoside hydrolase family 4; COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase; InterPro IPR019802:IPR001088; KEGG: cbe:Cbei_4847 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 4; SPTR: 6-phospho-beta-glucosidase; IMG reference gene:2503576387; PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain.
 
  
 0.502
AEB07401.1
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR017871:IPR003439:IPR003339:IPR003593; KEGG: bll:BLJ_1432 fused ATP-binding protein and permease of ABC transporter; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576111; PFAM: ABC transporter; Cobalt transport protein.
  
    0.489
AEB06661.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: tpd:Teth39_1153 RpiR family transcriptional regulator; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: Putative uncharacterized protein; IMG reference gene:2503575329; PFAM: Helix-turn-helix domain, rpiR family; SIS domain.
  
     0.454
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.