STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
tatCSec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (260 aa)    
Predicted Functional Partners:
AEB07571.1
InterPro IPR003998:IPR003369; KEGG: ele:Elen_2832 sec-independent translocation protein MttA/Hcf106; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative uncharacterized protein; IMG reference gene:2503576290; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family.
 
 
 0.974
AEB07498.1
Sec-independent translocation protein mttA/Hcf106; InterPro IPR003998:IPR006312:IPR003369; KEGG: shi:Shel_13320 twin arginine-targeting protein translocase, TatA/E family; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative uncharacterized protein; IMG reference gene:2503576213; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family.
  
 
 0.832
hisS
COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR015807:IPR006195:IPR002314:IPR004154:IPR 004516; KEGG: apv:Apar_0403 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; IMG reference gene:2503576288; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase.
     
 0.702
AEB07158.1
Signal recognition particle-docking protein FtsY; COGs: COG0552 Signal recognition particle GTPase; InterPro IPR004390:IPR003593:IPR013822:IPR000897; KEGG: apv:Apar_0850 signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; TIGRFAM: signal recognition particle-docking protein FtsY; IMG reference gene:2503575849; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signa [...]
 
   
 0.573
secA
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
  
  
 0.566
AEB07572.1
Anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: apv:Apar_1096 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; IMG reference gene:2503576291; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
       0.544
secY
Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
 
   
 0.540
AEB06408.1
InterPro IPR006058:IPR017900:IPR017896; KEGG: apv:Apar_0185 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575061.
 
   
 0.517
AEB06985.1
COGs: COG0681 Signal peptidase I; InterPro IPR000223:IPR019759; KEGG: ccu:Ccur_00350 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Putative uncharacterized protein; TIGRFAM: signal peptidase I; IMG reference gene:2503575666; PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
     
 0.457
AEB07568.1
COGs: COG2352 Phosphoenolpyruvate carboxylase; InterPro IPR018129:IPR001449:IPR021135; KEGG: ele:Elen_2973 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region; PRIAM: Phosphoenolpyruvate carboxylase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576287; PFAM: Phosphoenolpyruvate carboxylase; Belongs to the PEPCase type 1 family.
     
 0.457
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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