STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07601.1Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: apv:Apar_0125 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576321; PFAM: Oxidoreductase family, NAD-binding Rossmann fold. (389 aa)    
Predicted Functional Partners:
AEB07858.1
Galactokinase; COGs: COG0153 Galactokinase; InterProIPR000705:IPR006203:IPR019539:IPR006204:IPR 006206; KEGG: apv:Apar_0819 galactokinase; PFAM: GHMP kinase; Galactokinase galactose-binding domain; PRIAM: Galactokinase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576583; PFAM: Galactokinase galactose-binding signature; GHMP kinases N terminal domain.
 
 
 0.746
AEB06819.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rcp:RCAP_rcp00008 protein FrlC; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2503575494; PFAM: Xylose isomerase-like TIM barrel.
 
  
 0.627
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
 0.620
AEB07602.1
COGs: COG0514 Superfamily II DNA helicase; InterProIPR018329:IPR002121:IPR014021:IPR001650:IPR 011545:IPR018982:IPR014001; KEGG: ele:Elen_1066 ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; RQC domain; HRDC domain protein; SMART: helicase domain protein; DEAD-like helicase; HRDC domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: ATP-dependent DNA helicase, RecQ family; IMG reference gene:2503576322; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA [...]
   
   0.596
AEB07174.1
COGs: COG1454 Alcohol dehydrogenase class IV; InterProIPR012079:IPR000408:IPR018211:IPR015590:IPR 001670; KEGG: eel:EUBELI_02054 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575865; PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.579
AEB07223.1
dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888:IPR001509; KEGG: blo:BL0229 dTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; IMG reference gene:2503575919; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.579
AEB06432.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: csc:Csac_0600 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative sugar phosphate isomerasesiderophore/epimerase; IMG reference gene:2503575090; PFAM: Xylose isomerase-like TIM barrel.
  
  
 0.578
AEB07802.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: ere:EUBREC_2881 AP-endonuclease/AP-lyase; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2503576526; PFAM: Xylose isomerase-like TIM barrel.
  
  
 0.578
AEB07765.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: efa:EF0438 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: AP endonuclease; IMG reference gene:2503576486; PFAM: Xylose isomerase-like TIM barrel.
  
  
 0.576
AEB06821.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: cbe:Cbei_4798 ribokinase-like domain-containing protein; PFAM: PfkB domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575496; PFAM: pfkB family carbohydrate kinase.
 
  
 0.540
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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