STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07622.1Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterProIPR018120:IPR006128:IPR006311:IPR017909:IPR 006127; KEGG: afr:AFE_0602 cation ABC transporter, periplasmic cation-binding protein, putative; PFAM: periplasmic solute binding protein; SPTR: Cation ABC transporter, periplasmic cation-binding protein, putative; IMG reference gene:2503576342; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family. (326 aa)    
Predicted Functional Partners:
AEB07621.1
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: afr:AFE_0603 cation ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Cation ABC transporter, ATP-binding protein, putative; IMG reference gene:2503576341; PFAM: ABC transporter.
  
 0.994
AEB07620.1
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: bpy:Bphyt_0294 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein; IMG reference gene:2503576340; PFAM: ABC 3 transport family.
 
  
 0.987
AEB07619.1
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: bpy:Bphyt_0295 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein; IMG reference gene:2503576339; PFAM: ABC 3 transport family.
 
  
 0.977
AEB07623.1
COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: ccu:Ccur_04330 Fe2+/Zn2+ uptake regulation protein; SPTR: Putative ferric uptake regulation protein; IMG reference gene:2503576343; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
  
  
 0.680
AEB06715.1
COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR017926:IPR000728:IPR010918:IPR010141; KEGG: ele:Elen_0262 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Putative uncharacterized protein; TIGRFAM: phosphoribosylformylglycinamidine synthase; IMG reference gene:2503575384; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycin [...]
     
 0.609
rpsZ
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.582
rpmB
LSU ribosomal protein L28P; InterPro IPR001383; KEGG: shi:Shel_09970 LSU ribosomal protein L28P; PFAM: ribosomal protein L28; SPTR: Putative uncharacterized protein; TIGRFAM: ribosomal protein L28; IMG reference gene:2503575864; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.581
AEB06791.1
COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: pfr:PFREUD_01450 cell envelope-related function transcriptional attenuator common domain; PFAM: cell envelope-related transcriptional attenuator; SPTR: Cell envelope-related function transcriptional attenuator common domain; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; IMG reference gene:2503575466; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
 
   
 0.557
AEB06321.1
Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367; KEGG: apv:Apar_1294 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor; SPTR: Putative uncharacterized protein; IMG reference gene:2503574969; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
  
  
 0.556
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
  
 0.470
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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