STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07655.1Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: cbe:Cbei_0763 RpiR family transcriptional regulator; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; SPTR: Putative uncharacterized protein; IMG reference gene:2503576375; PFAM: SIS domain; Helix-turn-helix domain, rpiR family. (289 aa)    
Predicted Functional Partners:
AEB06230.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: efa:EF3286 phosphosugar-binding transcriptional regulator, putative; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: Putative phosphosugar-binding transcriptional regulator; IMG reference gene:2503574877; PFAM: Helix-turn-helix domain, rpiR family; SIS domain.
  
     0.775
AEB07045.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000276:IPR000281:IPR001347; KEGG: lrh:LGG_00094 hypothetical protein; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; SPTR: Predicted protein; IMG reference gene:2503575734; PFAM: SIS domain; Helix-turn-helix domain, rpiR family.
  
     0.766
AEB07654.1
Methylthioadenosine nucleosidase; COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845:IPR010049; KEGG: blt:Balat_0340 5-methylthioadenosine nucleosidase; PFAM: purine or other phosphorylase family 1; PRIAM: Adenosylhomocysteine nucleosidase; SPTR: Putative uncharacterized protein; TIGRFAM: MTA/SAH nucleosidase; IMG reference gene:2503576374; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase.
       0.741
AEB06697.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: sga:GALLO_1621 transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: Transcriptional regulator, RpiR family protein; IMG reference gene:2503575366; PFAM: Helix-turn-helix domain, rpiR family; SIS domain.
  
     0.730
AEB06661.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: tpd:Teth39_1153 RpiR family transcriptional regulator; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: Putative uncharacterized protein; IMG reference gene:2503575329; PFAM: Helix-turn-helix domain, rpiR family; SIS domain.
  
     0.725
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.545
AEB07656.1
COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771; KEGG: lsg:lse_2122 fructose-bisphosphate aldolase, class II family; PFAM: ketose-bisphosphate aldolase class-II; PRIAM: Tagatose-bisphosphate aldolase; SPTR: Putative uncharacterized protein; TIGRFAM: ketose-bisphosphate aldolase; IMG reference gene:2503576376; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases.
     
 0.503
AEB07401.1
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR017871:IPR003439:IPR003339:IPR003593; KEGG: bll:BLJ_1432 fused ATP-binding protein and permease of ABC transporter; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576111; PFAM: ABC transporter; Cobalt transport protein.
  
    0.489
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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