STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07711.1COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: lmc:Lm4b_01052 transketolase; PFAM: Transketolase domain-containing protein; SPTR: Transketolase, N-subunit; IMG reference gene:2503576431; PFAM: Transketolase, thiamine diphosphate binding domain. (282 aa)    
Predicted Functional Partners:
AEB06757.1
COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR020826:IPR005475:IPR005476; KEGG: apv:Apar_0334 transketolase central region; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Transketolase; IMG reference gene:2503575430; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
 0.999
AEB07710.1
COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: gym:GYMC10_3004 transketolase domain protein; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Transketolase, C-subunit; IMG reference gene:2503576430; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
 0.999
AEB07023.1
COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: apv:Apar_0731 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Putative uncharacterized protein; TIGRFAM: ribulose-phosphate 3-epimerase; IMG reference gene:2503575709; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.
 
 0.992
AEB07333.1
COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: tau:Tola_1978 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; IMG reference gene:2503576038; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.
 
 
 0.936
AEB06683.1
COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: sub:SUB0285 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; IMG reference gene:2503575352; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.
 
 
 0.935
AEB06308.1
COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: shi:Shel_21560 ribose-5-phosphate isomerase; PFAM: Ribose/galactose isomerase; SPTR: Putative uncharacterized protein; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; IMG reference gene:2503574956; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.
  
 
 0.920
pgi
COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672:IPR018189; KEGG: bad:BAD_0231 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; IMG reference gene:2503575489; PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
   
 0.918
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
    
 0.916
AEB06790.1
Transaldolase; COGs: COG0176 Transaldolase; InterPro IPR001585; KEGG: apv:Apar_0332 transaldolase; PFAM: Transaldolase; SPTR: Transaldolase; IMG reference gene:2503575465; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family.
    
 0.916
AEB07202.1
Transaldolase; COGs: COG0176 Transaldolase; InterPro IPR001585; KEGG: bmq:BMQ_3648 putative transaldolase; PFAM: Transaldolase; SPTR: Putative transaldolase; IMG reference gene:2503575893; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family.
    
 0.916
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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