STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07719.1Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR004039:IPR009040:IPR003251; KEGG: apv:Apar_0122 rubrerythrin; PFAM: Rubrerythrin; SPTR: Putative uncharacterized protein; IMG reference gene:2503576439; PFAM: Rubrerythrin. (179 aa)    
Predicted Functional Partners:
AEB06762.1
COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: shi:Shel_24760 conserved protein of DIM6/NTAB family; PFAM: flavin reductase domain protein FMN-binding; SPTR: Putative uncharacterized protein; IMG reference gene:2503575435; PFAM: Flavin reductase like domain.
    
 0.917
AEB06951.1
Hydrogenase, Fe-only; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR001041:IPR017896:IPR017900:IPR000283:IPR 019574:IPR004108:IPR003149:IPR013352; KEGG: eel:EUBELI_00201 NADH dehydrogenase I chain G; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit; SPTR: Putative uncharacterized protein; TIGRFAM: hydrogenase, Fe-only; IMG reference gene:2503575631; PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster binding do [...]
    
 0.897
AEB06495.1
Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254:IPR016440; KEGG: apv:Apar_0063 beta-lactamase domain protein; PFAM: flavodoxin/nitric oxide synthase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575156; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin.
 
  
 0.720
AEB07270.1
Desulfoferrodoxin ferrous iron-binding region; COGs: COG2033 Desulfoferrodoxin; InterPro IPR002742; KEGG: cac:CA_C2450 desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; SPTR: Putative uncharacterized protein; IMG reference gene:2503575969; PFAM: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain.
 
  
 0.670
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
  
  
 0.614
AEB07532.1
KEGG: ele:Elen_2125 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576251.
  
  
 0.553
AEB07720.1
COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265:IPR004036; KEGG: apv:Apar_0121 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576440; PFAM: HhH-GPD superfamily base excision DNA repair protein.
       0.513
AEB06763.1
InterPro IPR004039; KEGG: apv:Apar_1271 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2503575436; PFAM: Rubredoxin.
  
  
 0.501
AEB07392.1
Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ccu:Ccur_01120 Fe2+/Zn2+ uptake regulation protein; PFAM: ferric-uptake regulator; SPTR: Putative uncharacterized protein; IMG reference gene:2503576102; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
  
  
 0.501
AEB07623.1
COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: ccu:Ccur_04330 Fe2+/Zn2+ uptake regulation protein; SPTR: Putative ferric uptake regulation protein; IMG reference gene:2503576343; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
  
  
 0.501
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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