STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07727.1Protein of unknown function DUF988; COGs: COG4708 membrane protein; InterPro IPR010387; KEGG: apv:Apar_1325 protein of unknown function DUF988; PFAM: protein of unknown function DUF988; SPTR: Putative uncharacterized protein; IMG reference gene:2503576448; PFAM: QueT transporter. (190 aa)    
Predicted Functional Partners:
AEB07682.1
Hypothetical protein; InterPro IPR013838; KEGG: ele:Elen_2748 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576402.
  
     0.665
AEB07726.1
KEGG: ccu:Ccur_01130 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576447.
       0.539
AEB07725.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR003594:IPR005467:IPR010559:IPR004358; KEGG: apv:Apar_1324 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576446; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.534
AEB07883.1
COGs: COG4932 outer membrane protein; InterPro IPR008454; KEGG: ele:Elen_0909 Cna B domain protein; PFAM: Cna B domain protein; SPTR: Cna B domain protein; IMG reference gene:2503576612; PFAM: Cna protein B-type domain.
 
     0.509
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.