STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07758.1Type III effector Hrp-dependent outer protein; COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: dda:Dd703_2153 protein-N(pi)-phosphohistidine--sugar phosphotransferase; PFAM: type III effector Hrp-dependent outers; SPTR: Protein-N(Pi)-phosphohistidine--sugar phosphotransferase; IMG reference gene:2503576479; PFAM: Protein of unknown function, DUF1537. (454 aa)    
Predicted Functional Partners:
AEB07759.1
2-keto-3-deoxygluconate permease; InterPro IPR004684; KEGG: cro:ROD_50561 putative 2-keto-3-deoxygluconate permease; PFAM: 2-keto-3-deoxygluconate permease; SPTR: Putative 2-keto-3-deoxygluconate permease; IMG reference gene:2503576480; PFAM: 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter; TC 2.A.10.1.1.
 
   
 0.952
AEB07630.1
PTS system, glucitol/sorbitol-specific, IIBC subunit; COGs: COG3732 Phosphotransferase system sorbitol-specific component IIBC; InterPro IPR004702:IPR011618:IPR011638; KEGG: lca:LSEI_2722 sorbitol PTS, EIIBC; PFAM: Sorbitol phosphotransferase protein II domain-containing protein; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Sorbitol PTS, EIIBC; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; IMG reference gene:2503576350; PFAM: Sorbitol phosphotransferase enzyme II C-terminus; Sorbitol phosphotransferase enzyme II N-terminus; TIGRFAM: PTS system [...]
 
 
    0.906
AEB06449.1
4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: ere:EUBREC_1204 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; IMG reference gene:2503575107; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
     0.873
AEB06446.1
Type III effector Hrp-dependent outer protein; COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: clj:CLJU_c03820 hypothetical protein; PFAM: type III effector Hrp-dependent outers; SPTR: Uncharacterized protein conserved in bacteria; IMG reference gene:2503575104; PFAM: Protein of unknown function, DUF1537.
  
     0.775
AEB06445.1
Sigma54 specific transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR010524:IPR002197; KEGG: clj:CLJU_c03810 putative transcriptional regulator; PFAM: Propionate catabolism activator domain-containing protein; helix-turn-helix Fis-type; SPTR: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; IMG reference gene:2503575103; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Propionate catabolism activator.
 
     0.575
AEB07757.1
AMMECR1 domain protein; COGs: COG3885 conserved hypothetical protein; InterPro IPR002733:IPR004183; KEGG: ele:Elen_1695 hypothetical protein; PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: 3,4-dihydroxyphenylacetate 2,3-dioxygenase, AMMECR1 domain protein; IMG reference gene:2503576478; PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family.
       0.468
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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