STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07768.1COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500; KEGG: cac:CA_C2606 hypothetical protein; PFAM: Ribose/galactose isomerase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576490; PFAM: Ribose-5-phosphate isomerase; Ribose/Galactose Isomerase. (213 aa)    
Predicted Functional Partners:
AEB07767.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR020904:IPR002198:IPR002347; KEGG: snt:SPT_0369 gluconate 5-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Gluconate 5-dehydrogenase; IMG reference gene:2503576489; PFAM: short chain dehydrogenase.
 
  
 0.949
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
     
 0.633
AEB07769.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: spp:SPP_0363 sugar binding transcriptional regulator RegR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Sugar binding transcriptional regulator RegR; IMG reference gene:2503576491; PFAM: Bacterial regulatory proteins, lacI family; family.
 
   
 0.623
AEB06655.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR020904:IPR002347; KEGG: ske:Sked_06450 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Putative uncharacterized protein; IMG reference gene:2503575323; PFAM: short chain dehydrogenase.
 
  
 0.619
AEB06365.1
COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR002173:IPR011611:IPR017583:IPR002139; KEGG: apv:Apar_1252 1-phosphofructokinase; PFAM: PfkB domain protein; PRIAM: 1-phosphofructokinase; SPTR: 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; IMG reference gene:2503575017; PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family.
  
  
 0.577
AEB06530.1
COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611:IPR002173:IPR017583; KEGG: slg:SLGD_00827 tagatose-6-phosphate kinase/1-phosphofructokinase; PFAM: PfkB domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: 1-phosphofructokinase; IMG reference gene:2503575194; PFAM: pfkB family carbohydrate kinase; TIGRFAM: tagatose-6-phosphate kinase; hexose kinase, 1-phosphofructokinase family.
  
  
 0.577
AEB07215.1
1-phosphofructokinase; COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR017583:IPR011611; KEGG: str:Sterm_1965 1-phosphofructokinase; PFAM: PfkB domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: 1-phosphofructokinase; IMG reference gene:2503575910; PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family.
  
  
 0.577
AEB07761.1
1-phosphofructokinase; COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611:IPR017583; KEGG: apv:Apar_0322 1-phosphofructokinase; PFAM: PfkB domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: 1-phosphofructokinase; IMG reference gene:2503576482; PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family.
  
  
 0.577
AEB06436.1
Beta-glucuronidase; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103:IPR006101; KEGG: pjd:Pjdr2_4080 beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-glucuronidase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575094; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
 
  
 0.571
AEB07634.1
D-sorbitol 6-phosphate 2-dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR020904:IPR002198:IPR002347; KEGG: lrh:LGG_02722 sorbitol-6-phosphate 2-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Sorbitol-6-phosphate 2-dehydrogenase; IMG reference gene:2503576354; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.520
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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