STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07774.1Glycosyl hydrolase family 88; InterPro IPR010905; KEGG: pjd:Pjdr2_4134 glycosyl hydrolase family 88; PFAM: glycosyl hydrolase family 88; SPTR: Glycosyl hydrolase family 88; IMG reference gene:2503576496; PFAM: Glycosyl Hydrolase Family 88. (381 aa)    
Predicted Functional Partners:
AEB07772.1
KEGG: rec:RHECIAT_PC0000512 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576494.
 
     0.949
AEB07771.1
KEGG: bth:BT_3685 hypothetical protein; SPTR: Licheninase; IMG reference gene:2503576493; PFAM: Glycosyl hydrolases family 43.
 
   
 0.920
AEB07770.1
Hypothetical protein; COGs: COG5434 Endopygalactorunase; KEGG: pdi:BDI_2467 glycoside hydrolase family protein; SPTR: Glycoside hydrolase family 28; IMG reference gene:2503576492; PFAM: Glycosyl hydrolases family 28.
 
   
 0.878
AEB07780.1
COGs: COG4289 conserved hypothetical protein; InterPro IPR016624; KEGG: enc:ECL_04350 hypothetical protein; PFAM: Uncharacterised conserved protein UCP014753; SPTR: Putative uncharacterized protein; IMG reference gene:2503576502; PFAM: Uncharacterized protein conserved in bacteria (DUF2264).
 
     0.835
AEB07773.1
Xylan 1,4-beta-xylosidase; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: scl:sce4884 xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Xylan beta-1,4-xylosidase; IMG reference gene:2503576495; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
     
 0.811
AEB07777.1
COGs: COG3715 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIC; InterPro IPR004700; KEGG: cro:ROD_38601 putative PTS system, sorbose-specific IIC component; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; SPTR: Putative PTS system, sorbose-specific IIC component; IMG reference gene:2503576499; PFAM: PTS system sorbose-specific iic component.
 
  
 0.800
AEB07775.1
KEGG: pth:PTH_1214 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576497.
       0.773
AEB07767.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR020904:IPR002198:IPR002347; KEGG: snt:SPT_0369 gluconate 5-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Gluconate 5-dehydrogenase; IMG reference gene:2503576489; PFAM: short chain dehydrogenase.
 
   
 0.732
AEB06436.1
Beta-glucuronidase; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103:IPR006101; KEGG: pjd:Pjdr2_4080 beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-glucuronidase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575094; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
   
 0.692
AEB07765.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: efa:EF0438 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: AP endonuclease; IMG reference gene:2503576486; PFAM: Xylose isomerase-like TIM barrel.
 
    0.687
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.