STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07814.1COGs: COG2407 L-fucose isomerase and related protein; KEGG: cac:CA_C2610 L-fucose isomerase related protein; SPTR: L-fucose isomerase related protein; IMG reference gene:2503576538; PFAM: L-fucose isomerase, C-terminal domain. (498 aa)    
Predicted Functional Partners:
AEB07815.1
KEGG: cac:CA_C2611 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576539.
 
   
 0.904
xylB
Xylulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485:IPR006000; KEGG: ere:EUBREC_2559 xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Xylulokinase; TIGRFAM: xylulokinase; IMG reference gene:2503576540; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase.
 
  
 0.797
AEB07203.1
KEGG: ere:EUBREC_2594 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575894.
 
   
 0.748
AEB07817.1
Sugar (Glycoside-Pentoside-Hexuronide) transporter; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701:IPR001927; KEGG: ppe:PEPE_0185 Na+/xyloside symporter related transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Na+/xyloside symporter related transporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; IMG reference gene:2503576541; PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter.
     
 0.472
AEB07818.1
COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: ppe:PEPE_0184 alpha-xylosidase YicI; PFAM: glycoside hydrolase family 31; SPTR: Alpha-glucosidase, family 31 of glycosyl hydrolase; IMG reference gene:2503576542; PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
       0.405
AEB06908.1
Carbohydrate kinase, FGGY; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: pjd:Pjdr2_1888 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Carbohydrate kinase FGGY; IMG reference gene:2503575585; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
 
  
 0.403
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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