STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07825.1KEGG: shi:Shel_25980 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2503576549; PFAM: Protein of unknown function (DUF2992). (242 aa)    
Predicted Functional Partners:
AEB06161.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR010499; KEGG: dhd:Dhaf_2598 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription activator effector binding; SMART: regulatory protein MerR; SPTR: Transcriptional regulator; IMG reference gene:2503574802; PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain.
 
     0.737
AEB06386.1
Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: ele:Elen_2734 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503575039; PFAM: Bacterial regulatory proteins, tetR family.
 
     0.706
AEB07824.1
KEGG: shi:Shel_08110 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576548; PFAM: GIY-YIG catalytic domain.
       0.682
AEB06704.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: san:gbs0028 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575373.
 
     0.625
AEB06387.1
InterPro IPR011701; KEGG: ele:Elen_2733 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Permeases of the major facilitator superfamily; IMG reference gene:2503575040; PFAM: Major Facilitator Superfamily.
  
     0.598
AEB06160.1
Uncharacterized protein family UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: dhd:Dhaf_2599 protein of unknown function UPF0066; PFAM: Uncharacterised protein family UPF0066; SPTR: Putative uncharacterized protein; IMG reference gene:2503574801; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family.
  
     0.486
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
   
    0.459
AEB07677.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: ccu:Ccur_03350 predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503576397; PFAM: Predicted permease.
 
     0.429
coaX
Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.422
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.