STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07849.1InterPro IPR000297; KEGG: ele:Elen_0014 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576574; PFAM: PPIC-type PPIASE domain. (404 aa)    
Predicted Functional Partners:
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
  
 
 0.754
AEB07848.1
GatB/YqeY domain-containing protein; COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: ele:Elen_0243 GatB/YqeY domain-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576573; PFAM: Yqey-like protein.
       0.684
AEB07523.1
COGs: COG3629 DNA-binding transcriptional activator of the SARP family; KEGG: ele:Elen_2003 transcriptional regulator, SARP family; SPTR: Putative uncharacterized protein; IMG reference gene:2503576241; PFAM: Bacterial transcriptional activator domain.
 
     0.681
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
  
 0.598
clpP
ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.583
AEB07860.1
InterPro IPR010540; KEGG: ele:Elen_1156 protein of unknown function DUF1113; PFAM: protein of unknown function DUF1113; SPTR: Putative uncharacterized protein; IMG reference gene:2503576585; PFAM: Protein of unknown function (DUF1113).
 
     0.560
AEB07883.1
COGs: COG4932 outer membrane protein; InterPro IPR008454; KEGG: ele:Elen_0909 Cna B domain protein; PFAM: Cna B domain protein; SPTR: Cna B domain protein; IMG reference gene:2503576612; PFAM: Cna protein B-type domain.
 
     0.550
AEB07896.1
Membrane protein insertase, YidC/Oxa1 family; COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708:IPR020001:IPR013308; KEGG: apv:Apar_1366 60 kDa inner membrane insertion protein; PFAM: 60 kDa inner membrane insertion protein; SPTR: Putative uncharacterized protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; IMG reference gene:2503576625; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain.
 
  
 0.540
AEB06878.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
  
 0.527
AEB06709.1
KEGG: ccu:Ccur_11030 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575378.
 
     0.526
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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