STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07860.1InterPro IPR010540; KEGG: ele:Elen_1156 protein of unknown function DUF1113; PFAM: protein of unknown function DUF1113; SPTR: Putative uncharacterized protein; IMG reference gene:2503576585; PFAM: Protein of unknown function (DUF1113). (427 aa)    
Predicted Functional Partners:
AEB07861.1
Peptidase C60 sortase A and B; COGs: COG4509 conserved hypothetical protein; InterPro IPR005754; KEGG: apv:Apar_0032 sortase, SrtB family; PFAM: peptidase C60 sortase A and B; SPTR: Putative uncharacterized protein; IMG reference gene:2503576586; PFAM: Sortase family; TIGRFAM: sortase, SrtB family.
 
     0.811
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.769
AEB06376.1
Protein of unknown function DUF1113; COGs: COG4905 membrane protein; InterPro IPR010540; KEGG: bad:BAD_0916 hypothetical protein; PFAM: protein of unknown function DUF1113; SPTR: Putative uncharacterized protein; IMG reference gene:2503575029; PFAM: Protein of unknown function (DUF1113).
 
     0.733
AEB07883.1
COGs: COG4932 outer membrane protein; InterPro IPR008454; KEGG: ele:Elen_0909 Cna B domain protein; PFAM: Cna B domain protein; SPTR: Cna B domain protein; IMG reference gene:2503576612; PFAM: Cna protein B-type domain.
 
     0.706
AEB06381.1
Protein of unknown function DUF1113; COGs: COG4905 membrane protein; InterPro IPR010540; KEGG: bad:BAD_0916 hypothetical protein; PFAM: protein of unknown function DUF1113; SPTR: Putative uncharacterized protein; IMG reference gene:2503575034; PFAM: Protein of unknown function (DUF1113).
  
     0.686
AEB07523.1
COGs: COG3629 DNA-binding transcriptional activator of the SARP family; KEGG: ele:Elen_2003 transcriptional regulator, SARP family; SPTR: Putative uncharacterized protein; IMG reference gene:2503576241; PFAM: Bacterial transcriptional activator domain.
  
     0.614
AEB06397.1
KEGG: lfe:LAF_1406 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575050.
  
     0.595
carB
COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR011761:IPR005479:IPR005481:IPR005480:IPR 011607:IPR006275:IPR005483; KEGG: shi:Shel_13230 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: carbamoyl-phosphate synthase, large subunit; IMG reference gene:2503576588; PFAM: Carbamoyl-phosphate synthase L chain, ATP bin [...]
       0.579
carA
COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR017926:IPR002474:IPR000991:IPR006274:IPR 001317:IPR011702; KEGG: shi:Shel_13220 carbamoyl-phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: Putative uncharacterized protein; TIGRFAM: carbamoyl-phosphate synthase, small subunit; IMG reference gene:2503576589; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
       0.579
AEB07849.1
InterPro IPR000297; KEGG: ele:Elen_0014 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576574; PFAM: PPIC-type PPIASE domain.
 
     0.560
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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