STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07893.1COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: apv:Apar_1363 cobyrinic acid ac-diamide synthase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576622; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (266 aa)    
Predicted Functional Partners:
AEB07892.1
parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: apv:Apar_1362 ParB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Putative uncharacterized protein; TIGRFAM: parB-like partition protein; IMG reference gene:2503576621; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
 
 0.999
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.816
AEB07891.1
Hypothetical protein; KEGG: pol:Bpro_2585 PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576620.
       0.776
AEB06133.1
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
 
 
 0.774
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.622
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.617
AEB06187.1
Lipase class 3; InterPro IPR002921; KEGG: ele:Elen_2662 lipase class 3; PFAM: lipase class 3; SPTR: Putative uncharacterized protein; IMG reference gene:2503574830; PFAM: Lipase (class 3).
  
 
 0.611
AEB06189.1
InterPro IPR019931; KEGG: sgo:SGO_0107 LPXTG cell wall surface protein; SPTR: Putative uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; IMG reference gene:2503574832; TIGRFAM: streptococcal pilin isopeptide linkage domain.
  
 
 0.611
AEB07211.1
InterPro IPR008160; KEGG: bfs:BF3553 hypothetical protein; PFAM: Collagen triple helix repeat-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575906; PFAM: Collagen triple helix repeat (20 copies).
  
 
 0.611
AEB07212.1
Hypothetical protein; KEGG: amt:Amet_3803 copper amine oxidase domain-containing protein; SPTR: Copper amine oxidase domain protein; IMG reference gene:2503575907.
  
 
 0.611
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.