STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV97117.1PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: psn:Pedsa_3702 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug. (1094 aa)    
Predicted Functional Partners:
AEV97116.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: psn:Pedsa_3703 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
 
 
   0.948
AEV97118.1
beta-Ig-H3/fasciclin; PFAM: Fasciclin domain; InterPro IPR000782; KEGG: psn:Pedsa_3701 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Beta-Ig-H3/fasciclin.
 
     0.936
AEV97115.1
beta-Ig-H3/fasciclin; PFAM: Fasciclin domain; InterPro IPR000782; KEGG: psn:Pedsa_3704 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Beta-Ig-H3/fasciclin.
 
     0.931
AEV97114.1
beta-Ig-H3/fasciclin; PFAM: Fasciclin domain; InterPro IPR000782; KEGG: psn:Pedsa_3705 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SPTR: Beta-Ig-H3/fasciclin.
 
     0.913
AEV97112.1
Hypothetical protein; PFAM: SusD family; KEGG: psn:Pedsa_3707 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.896
AEV97126.1
KEGG: psn:Pedsa_3725 hypothetical protein; SPTR: Alpha-L-rhamnosidase.
 
     0.790
AEW00529.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: bvu:BVU_1800 hypothetical protein; PFAM: RagB/SusD; SPTR: Predicted protein.
  
 
   0.742
AEV97113.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: psn:Pedsa_3706 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor.
 
   
0.716
AEV97841.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: phe:Phep_2298 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
 
   0.708
AEV97121.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: psn:Pedsa_3709 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
 
 
   0.705
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.