STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV97306.1YceI family protein; PFAM: YceI-like domain; InterPro IPR007372; KEGG: cpi:Cpin_0225 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YceI family protein. (186 aa)    
Predicted Functional Partners:
AEV97305.1
KEGG: cpi:Cpin_0224 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.944
AEV97303.1
KEGG: cpi:Cpin_6395 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.856
AEV99616.1
KEGG: dfe:Dfer_4137 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.788
AEW00330.1
KEGG: dfe:Dfer_4137 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.788
AEW02000.1
KEGG: dfe:Dfer_4137 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.788
AEV97304.1
KEGG: shg:Sph21_4657 hypothetical protein.
       0.690
AEV99614.1
KEGG: cpi:Cpin_6395 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.643
AEW02002.1
PFAM: OB-fold nucleic acid binding domain; InterPro IPR004365; KEGG: cpi:Cpin_6395 hypothetical protein; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Putative uncharacterized protein.
 
     0.605
AEV99612.1
Hypothetical protein; PFAM: Planctomycete cytochrome C; KEGG: cpi:Cpin_6394 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.581
AEW02003.1
KEGG: fbc:FB2170_04835 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.497
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.