STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV97427.1KEGG: pfl:PFL_4904 hypothetical protein; SPTR: Integrase catalytic region. (195 aa)    
Predicted Functional Partners:
AEV97426.1
Hypothetical protein.
       0.768
AEV97428.1
Hypothetical protein.
       0.762
AEV97425.1
Hypothetical protein.
       0.663
AEV97429.1
KEGG: dfe:Dfer_5262 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.607
AEV97430.1
KEGG: chu:CHU_2871 ABC transporter substrate-binding protein; SPTR: Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
       0.607
AEV97424.1
Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: pne:Pnec_0211 polyprenyl synthetase; PFAM: Polyprenyl synthetase; PRIAM: Trans-hexaprenyltranstransferase; SPTR: Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.581
AEV97431.1
PFAM: Phage Tail Collar Domain; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: fjo:Fjoh_4046 phage tail collar domain-containing protein; PFAM: Phage Tail Collar; SPTR: Phage Tail Collar domain protein.
       0.576
AEV97423.1
Hypothetical protein.
       0.573
AEV97432.1
PFAM: Phage Tail Collar Domain; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: spc:Sputcn32_3551 phage tail collar domain-containing protein; PFAM: Phage Tail Collar; SPTR: Phage Tail Collar domain protein.
       0.521
AEV97433.1
PFAM: Phage Tail Collar Domain; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: chu:CHU_2872 microcystin dependent; PFAM: Phage Tail Collar; SPTR: Putative uncharacterized protein.
       0.475
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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